Gene family transcriptome
WebMar 24, 2024 · Therefore, transcriptome analysis was conducted to study the gene expression patterns and associated timber formation mechanisms in Chinese fir at different stand ages. In the present study, a total of 837,156 unigenes were identified in 84 samples from Chinese fir (pith and root) at different stand ages via RNA-Seq. WebJun 5, 2024 · A total of 7 members of the Dmrt gene family were identified with published transcriptome data of S. paramamosain and designated as Spdmrt-like, Spdmrt-11E, Spdmrt-3, Spdmrt-1a, Spidmrt-1, Spidmrt-2, and Spdsx, respectively. Among them, the Spdmrt-like gene contains a 675 bp ORF (open reading frame) encoded 224 aa protein, …
Gene family transcriptome
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WebMay 28, 2024 · Transcriptome Overview. De novo transcriptomes were derived from nine tissue samples each for both male and female S. littoralis. After quality control processing of the raw sequencing reads, input for the male and female transcriptomes consisted of 240.8 and 236.4 million read pairs, respectively (Additional file 1).Subsequent to cd-hit-est … WebApr 13, 2024 · Horns, also known as headgear, are a unique structure of ruminants. As ruminants are globally distributed, the study of horn formation is critical not only for increasing our understanding of natural and sexual selection but also for the breeding of polled sheep breeds to facilitate modern sheep farming. Despite this, a significant …
WebWe now extend that study to approximately 80% of the genome of Arabidopsis by using Affymetrix Arabidopsis ATH1 arrays and perform comparative analysis of gene family and gene ontology representation in the transcriptome of pollen and vegetative tissues. WebJun 20, 2024 · KNOX gene is a class of plant-specific HOMEOBOX transcription factors that play an important role in plant development. According to the sequence similarity of KNOX protein in expression patterns, homology domain, intron location and phylogenetic analysis, KNOX proteins were divided into two subgroups, KNOX I and KNOX II (Kerstetter et al., …
WebApr 7, 2024 · Transcriptome is a high-throughput sequencing technique that may acquire information on the vast majority of transcriptional gene ... (Karyotic Orthologous Groups), … Web9 hours ago · Under climate change, drought is one of the most limiting factors that influences wheat (Triticum aestivum L.) production. Exploring stress-related genes is vital for wheat breeding. To identify genes related to the drought tolerance response, two common wheat cultivars, Zhengmai 366 (ZM366) and Chuanmai 42 (CM42), were selected based …
WebJul 11, 2015 · To date, no transcriptome or genomics analysis of soybean SWEET genes has been reported. Results In the present investigation, we explored the evolutionary aspect of the SWEET gene family in diverse plant species including primitive single cell algae to angiosperms with a major emphasis on Glycine max.
WebMar 11, 2024 · Hence, in this study, we identified SPL gene family from ginseng transcriptome for the first time, and then conducted the basic bioinformatics analysis including phylogenetic relationship, network … g43 compensated barrelWebMar 2, 2024 · Overall, using a combination of gene family identification, transcriptome data, and WGCNA analysis, three core genes with differential expression significantly related to cold stress were identified, which can provide important information for the genetic improvement of S. album under cold stress. glassdoor securlyWebWe combined the genome sequence information from 50 Polyporales species, including 26 newly sequenced genomes and sought for genomic and functional adaptations to wood … glass door security barsWebJun 17, 2016 · To elucidate the expression of key SWEET genes involved in sucrose accumulation of sorghum, we performed transcriptome profiling by RNA-seq, categorization using phylogenetic trees, analysis of chromosomal synteny, and comparison of amino acid sequences between SIL-05 (a sweet sorghum) and BTx623 (a grain … glassdoor sedgwick irelandWebApr 4, 2024 · Transcriptome analysis of different tissues showed that members of the PgbZIP gene family were differentially expressed in different developmental stages and tissues of pomegranate. Among them, we selected PgbZIP16 and PgbZIP34 as candidate genes which affect anthocyanin accumulation. glassdoor security risk advisorsWebCommon Gene Expression Analysis Methods. A variety of methods may be used to profile gene expression for select targets of interest and/or analyze the coding … glassdoor senior product designer facebookWebMar 24, 2024 · Therefore, transcriptome analysis was conducted to study the gene expression patterns and associated timber formation mechanisms in Chinese fir at … glass door security